Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401875.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4979.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4255

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--526
171
3.1
168
83
7
603
37
11
13
37
1.80
53--2503
513
4.9
490
74
11
1209
37
11
15
35
1.84
550--3083
342
7.5
337
78
6
2230
37
12
14
35
1.84
550--2093
171
9.0
168
79
5
1289
37
12
15
35
1.84
543--4253
513
7.3
510
73
7
2438
36
12
14
34
1.83
2126--3083
171
5.6
169
78
5
969
37
12
14
35
1.85
2669--2708
21
1.9
21
89
0
62
25
15
17
42
1.88
3224--3505
149
1.9
149
86
4
408
41
10
13
34
1.80
3351--4255
171
5.3
169
77
7
806
36
13
13
36
1.84
3372--4255
333
2.6
332
79
7
890
37
13
13
35
1.84

Tables:   1

The End!