Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402002.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5098.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6858

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3232
171
19.0
171
78
5
2648
37
12
13
35
1.83
1--3232
341
9.5
341
78
5
2896
37
12
13
35
1.83
1--3230
512
6.3
512
79
5
3002
37
12
13
35
1.83
3661--5217
171
9.1
168
77
5
1278
34
14
12
38
1.84
3675--5213
340
4.5
340
79
4
1491
34
14
12
38
1.84
3852--5217
680
2.0
682
82
3
1678
34
14
12
38
1.84
5551--5905
171
2.1
172
80
4
387
34
13
12
38
1.83

Tables:   1

The End!