Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397728.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1026.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20345

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
232--566
171
2.0
172
82
3
415
37
11
12
38
1.81
4537--6121
171
9.3
170
71
4
889
34
12
11
37
1.80
6288--6828
169
3.2
170
75
3
417
34
12
10
38
1.78
8038--9122
171
6.4
172
76
4
827
33
12
11
38
1.79
8191--9122
341
2.8
331
80
7
931
33
12
11
38
1.80
9317--10306
171
5.8
170
74
7
647
35
12
11
37
1.79
10793--11604
171
4.8
168
76
7
539
35
13
11
38
1.81
12437--13847
343
4.1
339
76
5
973
35
12
11
37
1.80
12437--13847
171
8.3
170
75
4
996
35
12
11
37
1.80
16458--16922
170
2.7
170
78
5
483
36
11
11
38
1.78
17028--17564
170
3.2
171
79
10
474
37
11
10
40
1.76
17957--18971
170
6.0
171
78
6
756
36
12
10
39
1.78
18111--18971
341
2.5
342
79
3
905
36
12
11
39
1.79

Tables:   1

The End!