Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402041.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5135.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4682

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
773--1188
171
2.4
171
86
0
546
33
14
13
35
1.86
2712--4682
171
11.6
170
76
5
1528
35
12
11
37
1.79
3089--4682
681
2.4
675
80
4
1685
36
12
11
37
1.80
2716--4682
510
3.9
506
77
5
1613
35
12
11
37
1.79
4361--4673
159
2.0
159
83
6
393
37
14
10
38
1.80

Tables:   1

The End!