Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402063.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5160.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7848

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
726--2918
171
12.9
170
74
9
1309
35
13
13
37
1.84
726--1243
170
3.0
168
77
8
490
35
12
14
37
1.84
1262--2918
171
9.7
170
77
6
1327
35
13
13
37
1.84
1287--2811
682
2.2
681
79
5
1631
35
13
12
37
1.83
1262--2918
342
4.8
339
78
5
1491
35
13
13
37
1.84
1357--2918
513
3.0
502
79
6
1575
35
13
13
38
1.84
3687--7018
171
19.7
171
78
5
2685
34
12
12
39
1.82
4751--4780
15
1.9
16
93
6
53
33
0
6
60
1.23
3656--7018
514
6.6
511
77
7
2740
34
13
12
39
1.83
7161--7587
171
2.5
171
81
2
473
34
12
12
40
1.80
7260--7637
171
2.2
171
79
3
395
37
12
11
38
1.80

Tables:   1

The End!