Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402094.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_519.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28454

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--463
171
2.7
171
82
0
523
35
10
15
34
1.82
1227--1555
171
2.0
161
78
10
333
38
12
12
33
1.81
1817--2859
171
6.1
169
72
6
516
37
10
14
34
1.81
2010--2859
342
2.5
334
75
7
770
37
11
14
33
1.81
3985--4368
170
2.3
170
80
2
421
38
10
11
36
1.76
6833--6886
22
2.5
22
96
0
99
24
7
9
59
1.54
14350--14739
170
2.3
170
87
4
536
38
11
15
34
1.84
14982--15359
171
2.2
171
83
0
506
39
10
14
35
1.81
17616--17664
23
2.1
24
84
3
64
53
2
0
44
1.12
19365--19800
172
2.5
171
79
6
425
41
11
13
34
1.80
23960--25177
171
7.1
169
75
5
904
33
14
11
37
1.81
26094--26556
171
2.7
170
77
5
430
35
15
10
36
1.82
27064--27689
341
1.9
332
83
3
749
35
14
13
35
1.85
26914--28216
171
7.6
170
74
7
856
33
14
12
35
1.83

Tables:   1

The End!