Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397738.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1036.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14276

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4945--5260
171
1.9
162
82
6
318
32
11
16
36
1.85
5941--7785
171
10.9
170
80
3
1793
36
12
14
35
1.84
5941--7785
342
5.4
342
80
3
1987
36
12
14
35
1.84
7886--9170
171
7.5
170
83
3
1364
35
15
12
36
1.85
7886--9170
341
3.8
339
82
4
1494
35
15
12
36
1.85
7958--9170
512
2.4
510
83
3
1524
35
15
12
37
1.85
13173--13490
171
1.9
160
84
5
336
38
12
13
32
1.83

Tables:   1

The End!