Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397740.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1038.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17095

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3387--3756
172
2.1
174
82
3
435
35
13
11
39
1.81
10090--11056
171
5.6
168
75
6
737
34
13
11
37
1.82
11857--13421
171
9.1
171
77
3
1252
35
13
11
37
1.80
14339--17038
171
15.8
170
80
3
2557
35
13
11
38
1.80
14339--17038
343
7.9
343
80
3
2715
35
13
11
38
1.80
14346--17041
514
5.2
513
80
4
2725
35
13
11
38
1.80

Tables:   1

The End!