Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402127.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_522.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11327

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--831
171
4.9
171
82
2
929
37
14
12
36
1.84
1267--1861
171
3.5
170
77
2
534
33
16
11
34
1.85
2103--3051
172
5.5
170
74
4
620
33
13
13
34
1.84
5842--6418
171
3.4
167
75
6
550
33
15
12
36
1.85
5463--6416
171
5.6
171
73
7
495
34
14
12
35
1.84
6600--7159
172
3.3
168
77
6
554
34
15
12
35
1.85
6600--7351
171
4.4
169
75
6
591
33
15
11
35
1.84
7452--8020
171
3.4
165
78
8
476
34
13
12
39
1.82
9032--9393
170
2.1
169
81
6
412
36
12
12
38
1.82
9571--9903
169
2.0
171
81
3
404
36
14
10
38
1.80
9571--11327
171
10.3
171
73
4
1062
34
13
11
36
1.82
9921--10632
343
2.1
332
79
8
752
34
13
12
36
1.82

Tables:   1

The End!