Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402161.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5250.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5258

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2061
171
12.0
170
79
5
1902
36
13
11
39
1.80
97--2060
686
2.9
679
81
5
2108
36
13
11
39
1.80
2676--3179
172
2.9
169
80
5
532
34
12
13
39
1.82
3223--3621
171
2.3
169
79
8
414
33
13
12
41
1.81
3981--5258
170
7.5
170
79
4
1315
39
11
13
35
1.81
3981--5258
342
3.8
339
80
4
1340
39
11
13
35
1.81

Tables:   1

The End!