Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402165.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5254.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7165

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
917--2689
171
10.4
171
73
7
625
37
11
13
35
1.82
1669--2684
513
2.0
503
78
6
986
37
11
14
36
1.82
882--2689
342
5.3
341
75
6
1348
37
11
13
35
1.82
4147--4490
172
2.0
172
85
3
460
38
11
14
36
1.82
4888--5273
172
2.3
169
81
5
436
39
11
12
36
1.80
4588--7165
341
7.6
339
73
4
1573
35
11
12
35
1.80
4588--7063
171
14.5
163
69
11
600
35
11
12
35
1.80
6781--7107
171
2.0
161
77
8
325
35
11
13
36
1.81

Tables:   1

The End!