Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402190.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5279.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2113

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--429
170
2.5
171
77
7
406
38
13
13
34
1.84
283--569
151
1.9
151
83
2
371
37
13
14
34
1.86
626--2113
171
8.7
170
75
6
1066
39
11
13
35
1.81
678--2113
512
2.8
509
78
6
1317
39
11
13
35
1.80
680--2113
340
4.2
341
77
6
1039
39
11
13
35
1.80

Tables:   1

The End!