Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397752.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1049.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17799

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
942--1609
171
3.9
170
77
3
639
36
11
12
38
1.79
943--1605
341
1.9
341
83
1
855
36
11
12
38
1.79
1966--2469
171
3.0
169
80
6
493
35
11
10
40
1.76
2593--2923
171
1.9
170
85
4
461
38
12
13
34
1.84
3180--4681
171
8.9
171
76
4
1205
37
12
12
35
1.81
5247--5574
161
2.0
160
85
5
439
39
11
13
35
1.81
5937--6160
117
1.9
117
83
1
288
33
12
17
37
1.87
6237--7072
169
4.9
169
76
5
749
36
12
13
35
1.82
7485--14214
171
39.4
169
80
4
6372
38
10
13
36
1.80
14607--15143
171
3.1
168
78
5
450
37
11
13
35
1.81
15358--15944
171
3.4
169
79
3
541
36
11
14
35
1.83
16088--16766
172
4.0
171
80
5
550
38
10
13
36
1.78

Tables:   1

The End!