Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402279.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5361.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10800

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
852--2123
343
3.7
337
78
4
919
36
11
13
34
1.80
753--2144
171
8.1
170
74
3
1004
36
11
13
34
1.82
1192--2144
341
2.8
341
80
2
971
38
11
13
34
1.81
2923--3912
171
5.8
170
78
5
858
33
12
14
37
1.84
5616--6095
171
2.8
169
79
5
491
35
12
12
36
1.82
6273--7722
171
8.5
170
72
5
574
34
13
11
37
1.81
6273--7532
171
7.4
169
73
5
682
34
13
11
37
1.82
7101--7132
17
1.9
16
93
6
55
56
12
12
18
1.67
6273--7480
341
3.5
340
76
5
922
34
13
11
37
1.81
9106--10800
171
9.9
171
77
4
1242
35
12
12
37
1.82
9106--10800
511
3.3
505
80
3
1639
35
12
12
37
1.82
9120--10800
682
2.5
677
76
4
1699
35
12
12
37
1.82

Tables:   1

The End!