Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402313.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5395.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5956

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
887--1933
170
6.2
169
76
8
795
34
13
12
40
1.82
873--1824
340
2.8
333
80
6
966
34
13
12
40
1.82
2051--2353
149
2.0
149
82
4
362
38
13
11
36
1.82
2218--3263
340
3.1
336
81
5
1094
35
13
12
38
1.82
2272--3234
510
1.9
509
80
5
1122
35
13
12
39
1.81
2199--3275
170
6.3
169
77
8
900
36
12
12
38
1.81
3474--4112
171
3.7
170
77
5
509
36
11
11
38
1.78
3474--4318
172
4.9
170
75
4
610
35
12
11
38
1.79
4663--5335
339
2.0
332
78
5
674
35
12
11
37
1.79
4823--5371
171
3.2
170
71
4
478
35
12
10
36
1.79

Tables:   1

The End!