Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402329.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_541.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17574

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
916--1239
171
2.0
161
88
0
396
34
12
12
37
1.81
2485--2798
171
1.9
161
82
1
315
33
13
11
35
1.80
3162--4645
171
8.7
169
73
5
986
33
12
11
37
1.80
3162--4644
341
4.3
340
73
3
1123
33
12
11
37
1.80
3162--4540
512
2.7
511
79
2
1415
33
13
11
36
1.81
5732--5765
14
2.4
14
90
0
50
38
2
5
52
1.41
12417--13253
171
4.9
171
76
4
582
37
11
11
35
1.78
12417--13155
341
2.2
341
79
2
757
38
11
11
35
1.78
13356--14141
171
4.6
168
76
5
677
37
12
11
37
1.78
13356--14141
170
4.6
168
77
5
668
37
12
11
37
1.78

Tables:   1

The End!