Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402410.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_549.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25453

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
414--762
171
2.0
171
80
1
385
37
11
12
35
1.80
2150--3240
171
6.4
171
77
5
928
35
11
11
38
1.78
2150--3240
341
3.2
337
77
4
1025
35
11
11
38
1.78
2154--3240
512
2.1
512
79
4
1215
35
11
11
38
1.78
8745--9139
171
2.3
170
79
5
411
32
12
11
41
1.78
11668--12166
172
2.9
168
81
5
520
35
14
11
36
1.82
14264--14737
170
2.8
160
77
8
315
35
11
12
36
1.79
14247--15627
171
8.1
170
72
4
657
34
12
10
35
1.78
14958--15627
341
2.0
324
79
8
607
36
13
10
34
1.80
15781--16485
170
4.2
164
77
7
474
35
12
11
37
1.80
15843--16485
341
1.9
325
81
3
680
35
12
12
36
1.81
18119--18425
171
1.9
160
87
2
373
33
14
9
38
1.79
23478--23802
171
2.0
160
79
10
350
36
14
10
35
1.80
24036--24362
171
2.0
161
78
11
331
35
13
15
32
1.87

Tables:   1

The End!