Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397769.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1068.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13624

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1056
171
6.2
172
74
8
614
32
13
13
40
1.83
1--1056
343
3.1
341
81
5
1044
32
13
13
40
1.83
1164--2119
172
5.6
172
81
3
1034
35
13
12
38
1.82
2651--4398
171
10.2
170
79
4
1543
36
13
12
37
1.83
2651--4408
342
5.1
339
83
4
1831
36
13
12
37
1.83
6207--8193
172
11.7
170
71
6
1070
36
11
13
33
1.80
8596--8940
172
2.0
173
81
5
403
34
14
11
38
1.83
9463--12588
172
18.2
172
79
4
2857
37
12
14
34
1.84
9463--12571
687
4.5
684
80
4
3194
37
12
14
34
1.84
9476--12461
859
3.5
849
78
5
2833
37
12
14
35
1.84

Tables:   1

The End!