Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397772.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1070.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8361

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--313
170
1.8
169
83
0
410
34
13
12
39
1.82
526--1590
171
6.3
169
74
6
794
34
13
10
37
1.80
2578--4359
171
10.5
169
79
5
1599
35
12
12
38
1.81
4675--5351
169
4.0
168
75
5
576
35
12
12
36
1.81
5837--7559
171
10.1
170
73
6
1209
34
13
11
38
1.81
5781--7618
342
5.4
340
74
6
1403
34
13
11
38
1.81
5924--7617
511
3.3
513
78
4
1257
34
13
11
38
1.81
7573--7668
50
1.9
50
86
0
138
27
7
7
58
1.51
7626--7951
171
1.9
171
82
5
408
37
14
11
37
1.81

Tables:   1

The End!