Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402505.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_558.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12777

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
324--356
15
2.1
16
94
5
59
21
12
15
51
1.75
3882--3934
27
2.0
27
100
0
106
35
22
15
26
1.93
4005--5505
171
8.8
171
77
4
1231
38
12
13
35
1.82
4005--5505
340
4.4
341
79
5
1440
38
12
13
35
1.82
4132--5505
514
2.7
508
79
5
1345
38
12
12
35
1.81
10411--12275
170
10.9
168
76
7
1439
38
12
13
35
1.82
10411--12274
341
5.5
339
78
5
1633
38
12
13
35
1.82
10411--12296
511
3.7
509
80
5
1879
38
12
13
35
1.82

Tables:   1

The End!