Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402550.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5623.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5654

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
316--1136
171
4.8
170
71
5
521
36
12
12
36
1.81
3032--5475
172
14.3
170
73
7
1377
36
11
13
36
1.82
3030--4590
860
1.8
857
87
1
2349
37
11
14
36
1.83
3032--5653
171
15.3
170
74
6
1448
36
11
13
36
1.82
3432--5010
685
2.3
686
81
2
1819
37
11
14
36
1.82
3029--5621
513
5.0
512
75
6
1642
36
11
13
36
1.82

Tables:   1

The End!