Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402583.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5655.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4323

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157--1971
170
10.8
168
73
9
1071
33
13
12
37
1.82
1350--1971
324
1.9
324
81
4
754
34
14
10
38
1.81
2343--4056
681
2.5
675
77
7
1654
35
13
12
37
1.83
3128--4060
509
1.8
509
80
5
1143
35
12
13
38
1.83
2199--4319
171
12.5
171
73
6
1091
35
13
12
36
1.83

Tables:   1

The End!