Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402592.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5663.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3018

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
278--321
21
2.0
22
82
4
54
40
0
6
52
1.28
1--822
171
4.8
171
78
5
774
35
14
11
38
1.83
1--2995
342
8.5
340
69
14
1269
35
13
12
38
1.82
1092--2957
171
10.7
167
70
14
742
35
13
12
39
1.82
1754--1794
21
2.0
21
85
0
55
41
17
17
24
1.89
1670--2103
215
2.0
215
81
9
501
33
11
11
42
1.79
1014--2779
899
2.0
898
81
5
2120
35
13
12
39
1.82
2703--2743
21
2.0
21
85
9
57
34
17
7
41
1.77

Tables:   1

The End!