Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402651.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_572.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8786

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1555--2850
343
3.8
337
80
4
1266
35
14
12
37
1.84
1555--2850
172
7.6
170
80
4
1238
35
14
12
37
1.84
3767--4013
134
1.8
134
81
5
311
36
12
8
42
1.74
3904--5266
172
7.9
169
73
6
879
36
13
13
36
1.84
3901--5266
343
4.0
338
81
4
1377
36
13
13
36
1.84
3900--5266
515
2.7
515
74
4
1248
35
13
13
36
1.84
5455--5803
168
2.1
172
83
5
442
37
12
13
35
1.83
5530--5843
168
1.9
168
83
4
418
36
12
13
37
1.82
6188--7817
172
9.5
172
77
5
1482
36
14
12
36
1.85
6188--7817
340
4.8
340
83
4
1832
36
14
12
36
1.85
6188--7817
341
4.8
339
83
4
1760
36
14
12
36
1.85

Tables:   1

The End!