Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402672.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5738.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4727

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1158--2067
171
5.3
167
74
7
661
34
13
12
38
1.82
1101--2209
342
3.2
343
82
1
1219
34
13
13
37
1.85
2444--4045
170
9.4
170
75
5
1286
38
12
13
35
1.83
2444--4108
341
4.9
341
81
2
1797
38
13
13
35
1.84
2445--4107
171
9.7
169
74
6
1156
38
12
13
35
1.84
4192--4518
171
1.9
164
76
10
316
34
13
11
34
1.81

Tables:   1

The End!