Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402792.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_585.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22112

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1505
171
8.8
171
81
4
1574
36
12
14
35
1.85
670--710
21
2.0
21
85
4
57
19
14
19
46
1.84
1--1505
340
4.4
340
81
4
1577
36
12
14
35
1.85
5639--6974
171
7.8
171
80
5
1456
37
12
14
35
1.84
5639--7166
342
4.5
340
80
5
1515
36
12
14
34
1.84
13985--14630
171
3.8
170
75
7
513
37
12
12
36
1.80
15476--15799
171
1.9
162
78
7
328
38
12
11
34
1.79
18474--18917
171
2.6
167
80
7
421
34
12
13
39
1.82
19627--21210
171
9.3
171
79
7
1438
35
13
13
37
1.84
19627--21210
341
4.6
342
80
6
1635
35
13
13
37
1.84
19515--21210
512
3.3
507
79
7
1578
34
13
13
38
1.84
19646--21210
683
2.3
681
80
7
1778
34
13
13
38
1.84

Tables:   1

The End!