Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402798.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5855.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3739

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
662--987
171
2.0
161
83
5
327
37
11
12
36
1.78
1484--2286
171
4.7
170
80
4
853
36
11
13
37
1.82
1484--2336
342
2.5
341
81
8
960
35
12
13
37
1.83
2617--3738
171
6.6
172
84
3
1313
39
11
13
35
1.82
2610--3739
342
3.3
339
86
3
1455
39
11
13
35
1.82

Tables:   1

The End!