Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402812.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5868.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4716

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1464
342
4.3
337
80
6
1315
35
12
13
38
1.83
1--1464
171
8.5
169
78
7
1193
35
12
13
38
1.83
1364--1560
107
1.8
108
83
3
263
39
11
12
37
1.78
1472--4714
171
19.0
171
79
5
2712
35
14
12
38
1.84
1472--4714
341
9.5
340
78
6
2910
35
14
12
38
1.84

Tables:   1

The End!