Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402825.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_588.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15004

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1402--2112
171
4.2
170
75
5
537
35
14
11
35
1.82
2942--3327
171
2.3
170
81
2
425
36
12
12
38
1.81
3999--5766
170
10.4
170
77
5
1444
35
13
12
36
1.82
5960--6650
171
4.0
169
76
6
574
36
13
12
35
1.81
7816--8379
171
3.3
169
77
5
564
36
12
10
37
1.77
7816--8481
340
2.0
327
79
5
635
36
12
10
35
1.77
9562--10455
170
5.2
169
73
4
567
35
13
11
34
1.81
11062--12862
170
10.5
170
73
7
1061
35
12
11
36
1.81
11281--12262
511
1.9
499
78
6
1028
36
13
11
36
1.80
13306--13418
60
1.9
60
87
3
165
45
14
18
22
1.85
13828--15004
171
7.0
161
69
13
428
35
12
12
35
1.81

Tables:   1

The End!