Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402911.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_596.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25565

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1411--1935
171
3.1
171
76
1
417
32
13
10
37
1.80
6594--9389
171
16.4
172
70
5
802
35
10
13
33
1.79
10606--10918
171
1.9
160
81
5
299
36
11
13
35
1.80
12259--13010
171
4.4
171
76
4
543
38
11
14
34
1.82
13407--14289
171
5.2
171
77
4
683
37
10
13
35
1.79
14393--14957
170
3.3
170
81
2
639
34
14
10
39
1.79
15360--15391
16
2.0
16
100
0
64
31
18
12
37
1.88
15491--16363
171
5.1
168
75
5
592
33
13
11
37
1.81
15491--16361
341
2.6
338
73
6
772
33
13
11
37
1.81
22439--23093
170
3.8
170
78
5
653
40
11
13
34
1.81

Tables:   1

The End!