Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402998.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_665.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25824

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--1440
170
8.4
170
78
5
1175
35
15
11
38
1.83
25--1440
340
4.1
340
79
6
1331
35
15
11
38
1.83
1652--2022
170
2.2
168
80
3
404
35
11
10
42
1.76
2460--3595
171
6.7
171
77
7
936
39
12
13
34
1.82
2460--3595
342
3.3
334
79
7
1098
39
12
13
34
1.82
9965--11030
171
6.3
171
79
2
984
38
13
14
33
1.84
10163--11030
341
2.5
339
80
3
920
39
13
13
33
1.84
10907--11170
140
1.9
140
80
6
311
37
11
15
35
1.84
11035--11625
171
3.5
166
76
6
508
39
10
13
36
1.80
12540--13297
171
4.4
170
75
5
593
34
14
11
38
1.82
15550--16166
171
3.6
167
79
4
497
39
11
14
34
1.83
15728--16166
171
2.6
170
82
5
512
39
10
15
34
1.82
16969--18009
171
6.1
171
76
5
795
38
12
13
35
1.82
17096--18009
342
2.7
336
76
7
887
39
12
13
34
1.82

Tables:   1

The End!