Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397831.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1133.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5318

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
424--2575
171
12.6
171
75
6
791
35
13
12
37
1.83
1--2575
343
7.5
340
76
6
2009
35
13
12
37
1.82
4--2575
514
5.0
513
77
7
2113
35
13
12
37
1.82
2528--2626
50
2.0
50
97
0
189
53
11
14
21
1.71
2578--3113
171
3.1
167
81
5
597
35
12
11
39
1.81
3305--3736
171
2.5
171
82
5
489
34
12
12
39
1.82
3866--5313
172
8.5
170
79
5
1332
35
13
11
39
1.81
3866--5313
343
4.2
336
78
7
1271
35
13
11
39
1.81

Tables:   1

The End!