Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403043.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_71.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21018

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2710--2811
43
2.4
43
98
0
195
59
8
4
26
1.47
5030--6604
171
9.2
169
75
7
1144
36
12
14
36
1.84
5040--6575
343
4.5
343
76
7
1053
36
12
14
36
1.84
5362--6604
514
2.4
514
81
5
1433
36
12
14
37
1.84
6735--7351
170
3.6
171
73
6
500
37
11
12
34
1.80
10585--11991
344
4.1
342
77
6
1031
35
12
14
36
1.84
10519--11995
174
8.6
171
78
5
1183
35
12
15
36
1.84
12546--14131
171
9.3
168
74
6
982
36
11
14
35
1.82
12797--14131
169
7.8
169
76
7
858
38
11
13
35
1.81
16105--21016
171
28.7
171
74
6
3110
34
13
12
37
1.83
16105--20965
343
14.2
341
74
6
3233
34
13
12
37
1.83
16105--19866
685
5.5
676
76
7
2465
34
13
12
38
1.83
20162--20551
166
2.3
166
79
6
403
34
16
10
38
1.82

Tables:   1

The End!