Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403062.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_727.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20004

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
210--2205
171
11.7
169
81
5
2151
36
12
15
36
1.85
210--2205
511
3.9
508
82
3
2308
36
12
15
36
1.85
210--2162
854
2.3
850
83
4
2421
36
12
15
36
1.85
2544--2867
171
2.0
161
84
0
342
34
12
14
36
1.83
3658--4543
171
5.2
171
81
2
960
35
13
15
35
1.87
3658--4543
341
2.6
340
81
3
994
35
13
15
35
1.87
4721--6363
171
9.6
170
81
5
1773
37
13
14
35
1.85
4715--6363
512
3.2
502
82
5
1846
37
13
14
35
1.85
4715--6363
683
2.4
677
84
5
2072
37
13
14
35
1.85
6464--7534
342
3.1
338
82
5
1253
35
16
12
35
1.87
12193--12520
171
2.0
160
79
8
345
33
15
14
33
1.87
15507--17921
171
14.1
170
81
5
2294
35
13
15
34
1.86

Tables:   1

The End!