Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403079.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_744.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19429

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1188--3004
342
5.4
342
79
6
1615
38
11
14
34
1.82
1958--3004
171
6.1
171
79
6
1045
38
11
14
35
1.83
3237--3766
169
3.1
170
75
6
486
35
13
12
37
1.81
4805--7588
171
16.3
170
79
3
2627
34
14
12
38
1.83
8270--10156
172
11.0
172
79
2
1715
35
14
11
37
1.81
8270--10156
343
5.5
341
82
3
1866
35
14
11
37
1.81
8548--10156
514
3.1
507
79
5
1662
35
14
11
38
1.82
16471--16817
172
2.0
174
82
6
429
41
10
12
34
1.78
17895--18843
342
2.7
343
80
6
1054
36
14
12
36
1.84
17885--18843
171
5.5
170
78
5
877
35
14
12
37
1.84

Tables:   1

The End!