Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403089.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_756.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16185

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
558--1415
171
5.0
171
81
4
930
34
13
12
39
1.83
558--1415
341
2.5
341
81
4
946
34
13
12
39
1.83
2322--3467
171
6.7
168
79
7
967
39
11
13
35
1.81
2346--3467
340
3.3
335
79
6
1163
39
11
14
35
1.81
3621--4404
170
4.6
169
77
7
739
38
12
14
34
1.83
3621--4404
340
2.3
339
82
6
908
38
12
14
34
1.83
4721--5473
171
4.4
170
76
3
692
34
11
15
35
1.83
6716--7176
171
2.7
170
80
6
527
34
13
12
39
1.82
7558--10707
171
18.4
169
77
5
2619
34
14
11
39
1.82
7558--10707
683
4.6
677
78
6
2836
34
14
11
39
1.82
11624--13897
171
13.3
170
77
4
1868
34
13
11
39
1.81
11621--15832
342
12.1
339
71
10
2061
34
13
11
39
1.81
13915--15832
171
11.3
171
76
6
1579
34
13
11
39
1.82

Tables:   1

The End!