Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403099.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_764.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19797

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1019--1375
171
2.1
171
79
2
376
35
13
14
34
1.85
2344--2667
171
1.9
171
79
3
366
33
14
14
34
1.87
3619--4151
171
3.1
170
77
5
527
35
13
12
34
1.82
5007--6487
171
8.7
170
78
6
1363
35
13
12
37
1.83
5007--6466
511
2.9
507
81
5
1498
34
13
12
37
1.83
8446--8760
171
1.8
171
86
4
456
36
14
12
36
1.85
10747--10854
54
2.0
54
88
0
162
42
24
12
20
1.87
11416--11971
171
3.3
169
79
3
504
33
16
12
33
1.86
13875--15878
171
11.7
171
80
3
2018
34
14
12
37
1.85
13875--15878
341
5.9
341
80
3
2077
34
14
12
37
1.85
16165--16907
171
4.4
171
75
3
462
33
12
11
37
1.80
17564--19321
172
10.4
171
79
7
1751
35
14
12
38
1.83

Tables:   1

The End!