Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403143.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_810.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18372

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
295--334
21
1.9
21
85
10
55
30
22
7
40
1.81
6--1622
172
9.5
171
78
5
1333
39
11
13
35
1.81
104--1622
341
4.4
339
80
5
1556
38
11
13
35
1.82
1849--3088
341
3.6
340
81
5
1308
38
11
12
36
1.81
1852--3088
171
7.3
168
77
7
1097
38
11
13
36
1.81
3205--3769
171
3.3
169
77
3
519
39
11
12
35
1.80
6207--7578
171
8.0
169
76
8
966
36
11
13
36
1.82
6207--7582
342
4.0
338
78
6
1208
36
11
14
36
1.82
8528--9682
171
6.8
168
75
8
721
40
11
13
35
1.80
8885--9521
344
1.9
335
79
9
725
40
10
12
35
1.78
12812--14266
171
8.5
171
77
6
1186
39
11
13
35
1.81
15152--15536
172
2.2
172
85
4
519
38
10
14
35
1.81
15152--15589
171
2.5
171
82
4
542
36
12
14
36
1.84
15983--16333
170
2.1
170
80
5
397
38
11
13
36
1.82

Tables:   1

The End!