Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403147.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_814.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14450

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60--317
129
2.0
130
83
2
331
40
18
11
29
1.86
1366--3019
171
9.6
169
76
6
1267
35
13
13
36
1.84
1438--2959
341
4.4
344
76
8
1111
35
13
13
36
1.84
1783--2777
530
1.9
528
82
4
1252
36
13
13
37
1.83
4812--5643
171
4.9
170
80
5
892
35
14
12
37
1.84
4812--5643
342
2.4
340
83
3
1046
35
14
12
37
1.84
5744--6710
171
5.6
171
80
5
974
37
11
15
35
1.84
5744--6710
173
5.6
170
80
5
946
37
11
15
35
1.84
5744--6711
343
2.8
339
81
5
1151
37
11
15
35
1.84
6902--7440
170
3.2
170
84
5
646
38
12
14
35
1.83
8285--10836
511
5.0
509
78
6
2349
35
14
11
36
1.83
8360--10836
171
14.5
169
78
4
2253
35
14
11
36
1.84
8285--10836
341
7.5
339
77
5
2246
35
14
11
36
1.83
11795--12213
173
2.4
171
79
7
447
34
13
13
37
1.85
13200--13666
172
2.7
171
81
4
514
37
11
14
36
1.83
13571--13809
122
2.0
122
82
0
289
31
12
18
37
1.87
13681--14203
170
3.1
170
80
3
615
38
14
13
33
1.85

Tables:   1

The End!