Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403162.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_829.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23601

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105--532
169
2.5
168
83
6
540
36
15
12
35
1.85
4896--5318
171
2.5
171
75
5
395
34
15
9
38
1.80
7048--7365
169
1.9
170
81
5
385
36
15
8
39
1.78
9850--10297
170
2.6
168
79
4
434
37
11
11
39
1.78
9999--10366
170
2.2
170
78
3
373
37
13
9
39
1.77
10711--11217
170
3.0
171
80
6
549
35
12
12
40
1.80
11260--11939
172
3.9
172
78
4
593
34
12
11
40
1.80
14430--17512
171
18.1
168
73
8
1653
34
14
10
36
1.81
14430--17512
342
9.0
337
72
7
1860
34
14
10
36
1.81
18501--18934
171
2.5
169
79
7
452
36
14
9
39
1.79
20565--20894
171
2.0
162
83
4
335
35
13
10
37
1.79
22598--23089
172
2.9
172
78
3
499
36
14
10
35
1.82

Tables:   1

The End!