Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403193.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_861.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22647

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9405--10804
171
8.2
169
76
5
1191
37
13
14
34
1.86
9405--10807
513
2.7
512
87
2
1943
37
13
14
34
1.86
11537--12671
171
6.6
171
81
3
1228
38
13
13
34
1.85
13150--14665
171
8.9
170
82
4
1631
39
11
13
34
1.82
13150--14665
511
3.0
506
82
6
1813
39
11
13
34
1.82
13154--14665
682
2.2
684
81
6
1774
39
11
13
34
1.82
15003--15477
171
2.8
170
78
6
494
36
15
10
36
1.81
16113--17147
171
6.1
171
75
5
805
34
13
11
38
1.81
16121--17144
341
3.0
341
77
5
872
34
13
11
38
1.81
16158--17147
513
2.0
502
79
3
999
34
13
12
38
1.81
17455--17511
27
2.1
27
90
6
89
36
8
19
35
1.83
20201--20582
171
2.2
170
82
2
471
33
15
14
36
1.87
20749--21590
172
4.9
170
78
7
681
34
13
11
38
1.81
20750--21419
339
2.0
341
82
4
814
35
14
12
38
1.83

Tables:   1

The End!