Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403199.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_868.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23151

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2130
171
12.5
169
80
5
1853
38
11
13
36
1.81
1--2130
513
4.2
508
79
5
2089
38
11
13
36
1.81
2908--4499
171
9.4
169
77
7
1314
38
11
14
36
1.82
2907--4409
170
8.8
170
79
5
1337
38
11
14
36
1.82
2907--4409
511
2.9
504
81
6
1620
38
11
14
36
1.82
8282--9213
170
5.5
169
76
7
784
39
10
14
35
1.80
8469--9213
341
2.2
340
81
5
828
38
11
14
35
1.81
11003--11439
170
2.6
168
81
5
477
34
13
11
40
1.81
18095--19624
171
9.0
170
80
4
1497
36
14
12
36
1.83
20815--21171
170
2.1
171
84
6
467
36
14
12
36
1.83
21784--22432
171
3.8
169
72
5
448
35
12
12
34
1.81

Tables:   1

The End!