Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403252.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_924.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10231

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--1966
171
11.5
168
77
7
1577
38
12
14
35
1.83
12--1965
343
5.8
340
78
5
1806
38
12
14
35
1.83
12--1965
849
2.3
851
78
6
2012
38
12
14
35
1.83
2356--4659
171
13.5
170
78
5
1966
39
12
12
35
1.81
2365--4659
853
2.7
847
82
4
2649
39
12
12
34
1.81
5633--6833
170
7.1
170
78
5
982
39
13
12
35
1.82
5635--6833
341
3.5
338
78
6
909
39
13
12
35
1.82
7420--8268
171
5.0
171
78
4
737
39
12
12
35
1.81
7420--8743
342
3.9
341
75
9
1183
39
12
12
35
1.82
8590--8630
20
2.0
20
85
4
55
48
7
14
29
1.71
8268--8743
170
2.8
169
81
6
548
38
12
13
35
1.82
8741--9613
171
5.1
171
79
4
911
34
14
11
39
1.82

Tables:   1

The End!