Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397853.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1158.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7903

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1093
171
6.4
170
75
2
740
34
11
15
33
1.84
1329--1638
170
1.9
161
88
3
392
36
14
12
33
1.83
1196--2826
171
9.5
170
76
4
848
35
14
11
34
1.82
2986--4099
171
6.5
170
77
4
906
35
14
11
35
1.83
4306--4673
171
2.2
171
81
1
423
35
16
11
33
1.85
5093--7887
171
16.4
171
77
6
1499
35
14
11
36
1.82
5088--7903
341
8.2
339
78
5
2299
35
14
11
36
1.82
5989--7822
856
2.1
856
81
5
2089
36
14
11
37
1.83

Tables:   1

The End!