Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403258.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_931.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5244

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
603--1249
170
3.8
170
74
6
409
34
12
11
39
1.80
1718--2393
171
3.9
171
78
4
644
34
12
13
39
1.82
2327--2458
71
1.9
70
87
4
194
31
18
11
38
1.87
1985--2793
412
2.0
413
82
4
988
33
14
13
38
1.85
1789--3146
754
1.8
753
83
4
1799
34
14
12
38
1.84
2387--3951
171
9.2
168
78
6
1341
35
15
11
38
1.84
2393--3951
513
3.0
503
82
5
1711
35
15
11
38
1.84
4057--5244
170
7.0
168
78
7
1006
35
14
12
38
1.84
4057--5244
341
3.5
338
76
6
1051
35
14
12
38
1.84

Tables:   1

The End!