Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397854.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1159.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13008

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1101--1510
171
2.4
169
79
3
421
31
16
12
39
1.86
1833--2279
173
2.6
171
84
4
544
35
12
12
39
1.81
3099--4477
171
8.1
170
74
8
923
34
13
12
38
1.84
5295--6728
171
8.5
171
76
5
1140
35
12
12
38
1.81
5295--6331
510
2.0
511
80
3
1169
35
13
11
38
1.81
6066--6668
162
3.6
163
78
7
442
33
13
12
39
1.83
8809--10306
341
4.4
339
79
7
1151
34
12
12
40
1.80
8675--10577
512
3.7
510
79
5
1708
34
12
12
40
1.80
8784--10577
171
10.5
172
79
6
1375
34
12
12
40
1.81
10678--13008
171
13.7
170
76
8
1779
39
11
13
35
1.81
10678--13008
341
6.8
341
80
5
2139
39
11
13
35
1.81
10678--13008
512
4.6
510
78
6
2116
39
11
13
35
1.81
10678--13008
683
3.4
673
79
6
2190
39
11
13
35
1.81

Tables:   1

The End!