Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403267.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_940.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10423

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
404--2881
171
14.6
171
77
5
1882
35
12
11
38
1.80
404--2672
683
3.3
679
81
4
2037
35
12
11
38
1.80
404--2881
512
4.9
505
77
7
2019
35
12
11
38
1.80
4001--5230
171
7.2
168
79
6
1079
35
13
11
39
1.81
4001--5227
341
3.6
335
79
7
1222
34
13
11
39
1.81
5427--6412
171
5.8
167
73
7
691
35
12
12
36
1.81
6696--7030
169
2.0
169
81
5
392
37
12
13
36
1.82
8743--10423
171
9.9
169
80
8
1516
38
12
13
35
1.83
8743--10423
341
4.9
338
78
8
1615
38
12
13
35
1.83
8743--10423
849
2.0
849
83
5
2126
38
12
13
35
1.83

Tables:   1

The End!