Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403301.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_973.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18700

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
205--539
173
1.9
173
79
4
374
35
16
10
37
1.83
1--553
171
3.2
168
73
6
475
34
14
10
38
1.81
1727--1769
21
2.0
21
81
0
50
44
18
11
25
1.84
3019--4154
171
6.6
170
72
5
659
34
13
11
35
1.82
3019--4146
342
3.3
342
74
4
812
34
13
11
35
1.82
4785--5307
172
3.0
172
73
3
426
34
16
13
33
1.88
5596--6082
172
2.8
171
81
4
521
36
14
12
35
1.84
6390--7773
513
2.7
511
81
4
1573
35
14
12
36
1.84
6390--7786
171
8.1
170
80
4
1349
35
14
12
37
1.84
7887--8381
170
2.9
169
77
5
491
37
12
10
36
1.79
8832--10044
171
7.1
169
82
3
1292
35
14
12
37
1.85
8832--10044
341
3.6
338
81
4
1391
35
14
12
37
1.85
10167--11062
171
5.2
170
78
3
872
34
14
12
37
1.83
11813--12183
171
2.2
170
83
5
482
37
13
12
36
1.82
11773--13107
173
7.8
170
75
5
893
34
14
12
35
1.85
14239--16560
171
13.5
170
78
5
2023
35
15
12
36
1.85
14239--16560
517
4.5
512
82
3
2587
35
15
12
36
1.85
17445--17919
171
2.8
159
74
11
383
35
9
15
35
1.80

Tables:   1

The End!