Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397872.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1176.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30892

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33--1356
171
7.8
168
70
7
552
37
10
13
34
1.79
33--775
342
2.2
331
90
1
975
38
10
13
33
1.79
918--1589
331
2.0
331
79
4
719
36
8
13
37
1.76
919--1581
171
3.9
170
69
10
475
36
8
13
38
1.76
1679--2141
171
2.7
170
74
10
415
36
10
14
35
1.81
3598--4674
171
6.3
171
72
5
514
37
10
12
35
1.78
7793--8742
341
2.8
341
78
3
820
37
10
12
36
1.78
7793--8742
171
5.6
169
73
4
686
37
10
12
36
1.78
9319--9630
169
1.9
160
81
2
304
34
11
12
38
1.79
12279--12641
171
2.1
171
82
2
442
34
14
12
34
1.85
12279--12735
171
2.7
171
76
4
436
34
13
11
36
1.81
14168--14845
341
2.0
341
80
3
756
35
13
11
35
1.81
13285--15295
171
11.8
170
70
6
913
34
13
10
35
1.80
19325--21314
171
11.7
170
74
5
1402
36
10
13
35
1.80
19419--20746
683
2.0
673
81
3
1512
38
10
13
35
1.79
21565--22079
171
3.0
171
81
5
456
38
11
14
36
1.82
23722--24349
341
1.9
332
80
4
676
37
9
13
36
1.77
23137--24351
170
7.1
170
69
4
748
36
9
13
35
1.76
27812--29644
171
10.8
170
71
6
766
35
12
10
36
1.78
27890--29672
342
5.2
341
73
7
1090
35
12
10
36
1.79

Tables:   1

The End!