Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397875.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_118.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10079

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1828--3283
170
8.5
171
78
4
1188
37
11
14
35
1.83
1961--3278
171
7.7
170
78
5
918
37
11
14
35
1.82
1828--3272
341
4.2
341
78
5
1281
37
11
14
35
1.83
3143--3404
144
1.8
145
82
6
345
43
10
13
32
1.78
3285--4353
170
6.3
171
77
11
944
38
12
13
35
1.82
3285--4353
341
3.1
334
76
10
952
38
12
13
35
1.82
6254--7661
171
8.2
171
78
7
1322
39
11
14
35
1.81
6254--7577
342
3.9
341
82
4
1513
39
11
14
35
1.82
6211--7605
512
2.7
509
81
5
1605
38
11
14
35
1.82
8285--8926
171
3.7
170
79
4
517
37
11
12
35
1.80
9210--10079
171
5.1
169
76
5
660
37
11
13
34
1.81
9320--10079
342
2.2
342
85
1
977
38
11
12
33
1.79
9320--10071
171
4.4
170
77
6
667
39
11
12
33
1.79

Tables:   1

The End!